Identification of quantitative trait loci controlling rice mature seed culturability using chromosomal segment substitution lines

The genetic transformation efficiency of a rice variety is largely determined by its tissue culturability. Establishment of a highly efficient tissue-culture system has greatly accelerated the wide spread application of transgenic japonica varieties. However, such process for indica rice was hampered because this type of variety is recalcitrant to in vitro culture. This study aimed to map the quantitative trait loci (QTLs) for mature seed culturability using a chromosomal segment substitution lines (CSSL) population derived from a cross between an indica variety “Zhenshan 97B” and a japonica variety “Nipponbare”. The CSSLs consist of 139 lines each containing a single or a few introgression segments, and together covering the whole “Nipponbare” genome. Every CSSL was tested by culturing on the two medium systems developed for the respective indica and japonica parental varieties. The performance of culturability was evaluated by four indices: frequency of callus induction (CIF), callus subculture capability (CSC), frequency of plant regeneration (PRF) and the mean plantlet number per regenerated callus (MNR). All four traits displayed continuous variation among the CSSLs. With the culture system for japonica rice, three CIF QTLs, three CSC QTLs, three PRF QTLs and three MNR QTLs were detected. With the culture system for indica variety, six CIF QTLs, two CSC QTLs, three PRF QTLs and six MNR QTLs were identified, and these QTLs distributed on nine rice chromosomes. Two QTLs of CIF and two QTLs of MNR were detected in both the japonica and indica rice culture system. The correlation coefficients of all the four traits varied depending on the culture systems. These results provide the possibilities of enhancing the culturability of indica rice by marker-assisted breeding with those desirable alleles from the japonica. Lina Zhao and Hongju Zhou have contributed equally to this work.     

Bevacizumab and ranibizumab on microvascular endothelial cells: A comparative study

Given its broad effects in endothelium, vascular endothelial growth factor (VEGF) represents the primary rate‐limiting step of angiogenesis. Therefore, VEGF targeting therapies were soon developed. Bevacizumab and ranibizumab are two of these therapeutic agents already in clinical use. Bevacizumab was first used for cancer treatment, whereas ranibizumab was designed to target choroidal neovascularization, the main cause of blindness in age‐related macular degeneration. The present study aims to compare the multiple effects of bevacizumab and ranibizumab in human microvascular endothelial cells (HMECs). HMEC cultures were established and treated during 24 h with the anti‐VEGF agents within the intravitreal‐established concentration range or excipients. Analyses of VEGF content in cell media and VEGF receptor‐2 (VEGFR‐2) expression in cell lysates were performed. No cell cytotoxicity (MTS assay) was found in anti‐VEGF‐treated cultures at any concentration. Apoptosis (TUNEL assay) was significantly increased and cell proliferation (BrdU assay), migration (transwell assay) and assembly into vascular structures were significantly reduced by incubation with both agents at the two doses used. These findings were accompanied by a strong decrease in VEGF release, and in phosphorylated VEGFR‐2 and Akt expression for both agents at the clinical concentration. Interestingly, phosphorylated Erk was only significantly reduced upon bevacizumab treatment. In addition, proliferation was more affected by ranibizumab, whereas migration, capillary formation, and phosphorylated VEGFR2 expression were significantly reduced by bevacizumab as compared to ranibizumab. Therefore, although both agents presented anti‐angiogenic actions, distinct effects were exerted by the two molecules in HMEC. These findings suggest that a careful confirmation of these effects in clinical settings is mandatory. J. Cell. Biochem. 108: 1410–1417, 2009. © 2009 Wiley‐Liss, Inc.     

Gene flow from genetically modified rice to its wild relatives: Assessing potential ecological consequences

Pollen-mediated gene flow is the major pathway for transgene escape from GM rice to its wild relatives. Transgene escape to wild Oryza species having AA-genome will occur if GM rice is released to environments with these wild Oryza species. Transgenes may persist to and spread in wild populations after gene flow, resulting unwanted ecological consequences. For assessing the potential consequences caused by transgene escape, it is important to understand the actual gene flow frequencies from GM rice to wild relatives, transgene expression and inheritance in the wild relatives, as well as fitness changes that brought to wild relatives by the transgenes. This article reviews studies on transgene escape from rice to its wild relatives via gene flow and its ecological consequences. A framework for assessing potential ecological consequences caused by transgene escape from GM rice to its wild relatives is discussed based on studies of gene flow and fitness changes.     

城镇化对我国食物消费系统氮素水体排放的影响

城镇化的快速发展,将带来巨大的生态环境压力和严重的污染问题.以1982年、1992年和2002年我国城镇与农村居民食用氮的流动去向为对象,探讨了城镇化对氮素水体排放的影响.结果表明:城镇居民食用氮与排泄的粪尿氮高于农村居民;人均排入水体氮量,1982年城镇与农村居民大体相当,1992年、2002年城镇居民是农村居民2.8倍;粪尿氮排入水体比率,1982年城镇与农村基本相当,在7.5%左右,但到2002年城镇粪尿氮排入水体比率高达56.7%,城镇比农村要高34个百分点.情景分析结果表明,如果在人口增加的同时还要改善食物结构增加蛋白质摄入量, 2020年粪尿氮总产生量将增加121～155万t,排入水体氮量也将增加41～64万t.提高粪尿还田率、污水处理率及氮的去除率可以降低粪尿氮排入水体比率.     

基于模型和物质流分析方法的食物链氮素区域间流动——以黄淮海区为例

研究利用养分流动的方法建立区域氮素流动模型,试图分析氮素养分在区域间的流动状况.以黄淮海区为例,提出氮素调控策略.结果表明: 2005年,黄淮海区化肥、饲料、植物食物和动物食物氮素盈缺率分别为33%、-120%、38%和65%.养分势是区域食物链养分流动的原动力,此外,人口数、城镇化率、耕地面积、GDP、运输距离、运价、市场价格和政府调控等也是影响食物链氮素养分在区域间流动的重要因素.2005年,黄淮海区是化肥、食物氮素的源,而是饲料氮素的汇.北京地区无论化肥、饲料和食物氮素都为汇.北京地区单位耕地承载外地区调入的氮素养分负荷为872 kg/hm2.即使这些养分全部在本区域返还农田还存在很大的环境风险.因此,对环北京都市圈食物链氮素养分应该进行区域间协同管理.     

口蹄疫病毒三价复合多表位佐剂DNA疫苗构建及其免疫原性

以O型、A型口蹄疫病毒(FMDV)结构蛋白VP1全基因和AsiaI型FMDV两个基因拓扑型的结构蛋白VP1基因上的5个抗原表位基因作为主要免疫原基因,以来源于非结构蛋白3ABC和结构蛋白VP4上的3个Th2细胞表位基因作为辅助基因,构建了O型、A型和Asia1型FMDV复合多表位基因工程疫苗表达盒OAAT,在此基础上,以金黄色葡萄球菌肠毒素A(SEA)为基因佐剂,通过分子设计构建了SEA与OAAT融合表达基因。将构建好的表达盒OAAT与SEA融合表达基因克隆至真核表达载体PVAX1PCMV启动子下游,构建了口蹄疫三价基因佐剂DNA疫苗pEA。经Western blotting和IFA检测,目的蛋白在Hela细胞中获得正确表达。小鼠免疫实验表明,pA和pEA免疫组的血清抗体均能分别与O型、A型和AsiaI抗原反应,与对照组相比差异较显著,且pEA免疫组和灭活疫苗免疫组抗体水平均显著高于pA免疫组;同时pA和pEA免疫小鼠细胞因子IL-2、IFN-γ、IL-4和IL-10较对照组显著提高,且pEA免疫组的IL-2、IFN-γ和IL-4水平明显高于pA免疫组。用O/NY00和Asia1/YNBS/58株FMDV进行...     

基于单碱基延伸标签反应的常见食源性致病菌基因芯片检测方法的建立

针对8种常见的食源性致病菌(金黄色葡萄球菌、副溶血弧菌、单核细胞增生李斯特菌、沙门氏菌、阪崎肠杆菌、志贺氏菌、肠出血性大肠杆菌O157:H7和空肠弯曲杆菌),建立了基于单碱基延伸标签反应原理的基因芯片检测方法。筛选和整合8种食源性致病菌基因组中的特异性序列和相应PCR引物,致病菌靶DNA片段被扩增和纯化作为单碱基延伸标签反应的模板,反应产物在DNA芯片上与探针进行杂交反应,然后通过扫描基片的荧光强度进行判断。实验结果表明,可采用基于单碱基延伸标签反应的基因芯片方法同时特异性检测8种食源性致病菌,基因组DNA多重检测灵敏度可达到0.1pg,以鼠伤寒沙门氏菌为单一检测对象的细菌纯培养物灵敏度可达到5×102CFU/mL。本方法可以快速灵敏地检测食源性致病菌,为食源性疾病的诊断和防治提供了一个有效的方法。     

固定化脂肪酶催化毛油合成生物柴油

本研究开发了一种用石油醚提取毛油的工艺,研究了以提取的毛油和甲醇为原料,用固定化Candida sp.99-125脂肪酶催化合成脂肪酸甲酯(FAMEs)的可行性。同时考察了磷脂对固定化酶活性、反应起始速率、固定化酶使用批次的影响以及毛油和精炼油对固定化酶使用批次等的影响。研究结果表明,用磷脂质量分数为1%的石油醚悬液浸泡过的脂肪酶比仅用石油醚浸泡过的脂肪酶初始转酯化速率显著下降。当大豆油中无磷脂时,15min时FAMEs的产率为26.2%;磷脂质量分数为5%时,FAMEs降为12.4%。当大豆油中磷脂质量分数小于1%时,固定化酶使用10个批次,FAMEs产率无明显变化。固定化脂肪酶催化石油醚浸提得到的大豆和小桐子毛油,经过10个批次反应FAMEs产率都保持在70%以上,该固定化酶直接催化毛油生产生物柴油具有良好的工业化前景。